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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">RUDN Journal of Agronomy and Animal Industries</journal-id><journal-title-group><journal-title xml:lang="en">RUDN Journal of Agronomy and Animal Industries</journal-title><trans-title-group xml:lang="ru"><trans-title>Вестник Российского университета дружбы народов. Серия: Агрономия и животноводство</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2312-797X</issn><issn publication-format="electronic">2312-7988</issn><publisher><publisher-name xml:lang="en">Peoples’ Friendship University of Russia named after Patrice Lumumba</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">19837</article-id><article-id pub-id-type="doi">10.22363/2312-797X-2022-17-4-555-566</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Veterinary science</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Ветеринария</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Microbial diversity in the cecum of broiler chickens after introduction of coumarin and feed antibiotic into the diet</article-title><trans-title-group xml:lang="ru"><trans-title>Оценка микробного разнообразия слепого отдела кишечника цыплят-бройлеров при введении кумарина и кормового антибиотика в рацион</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-9015-8367</contrib-id><name-alternatives><name xml:lang="en"><surname>Duskaev</surname><given-names>Galimzhan K.</given-names></name><name xml:lang="ru"><surname>Дускаев</surname><given-names>Галимжан Калиханович</given-names></name></name-alternatives><bio xml:lang="en"><p>Doctor of Biology, Leading Researcher, Department of Feeding Agricultural Animals and Feed Technology, Deputy Director</p></bio><bio xml:lang="ru"><p>доктор биологических наук, ведущий научный сотрудник отдела кормления с/х животных и технологии кормов, заместитель директора</p></bio><email>gduskaev@mail.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-4907-9656</contrib-id><name-alternatives><name xml:lang="en"><surname>Lazebnik</surname><given-names>Kristina S.</given-names></name><name xml:lang="ru"><surname>Лазебник</surname><given-names>Кристина Сергеевна</given-names></name></name-alternatives><bio xml:lang="en"><p>Junior Researcher, Laboratory of Molecular Genetic Research in Animal Husbandry</p></bio><bio xml:lang="ru"><p>младший научный сотрудник лаборатории молекулярно-генетических исследований в животноводстве</p></bio><email>christinakondrashova94@yandex.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-4298-1663</contrib-id><name-alternatives><name xml:lang="en"><surname>Klimova</surname><given-names>Tatyana A.</given-names></name><name xml:lang="ru"><surname>Климова</surname><given-names>Татьяна Андреевна</given-names></name></name-alternatives><bio xml:lang="en"><p>Researcher, Laboratory of Microbiology</p></bio><bio xml:lang="ru"><p>научный сотрудник лаборатории микробиологии</p></bio><email>klimovat91@mail.ru</email><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Federal Research Centre of Biological Systems and Agrotechnologies of the RAS</institution></aff><aff><institution xml:lang="ru">Федеральный научный центр биологических систем и агротехнологий Российской академии наук</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2022-12-27" publication-format="electronic"><day>27</day><month>12</month><year>2022</year></pub-date><volume>17</volume><issue>4</issue><issue-title xml:lang="en">VOL 17, NO4 (2022)</issue-title><issue-title xml:lang="ru">ТОМ 17, №4 (2022)</issue-title><fpage>555</fpage><lpage>566</lpage><history><date date-type="received" iso-8601-date="2022-12-27"><day>27</day><month>12</month><year>2022</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2022, Duskaev G.K., Lazebnik K.S., Klimova T.A.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2022, Дускаев Г.К., Лазебник К.С., Климова Т.А.</copyright-statement><copyright-year>2022</copyright-year><copyright-holder xml:lang="en">Duskaev G.K., Lazebnik K.S., Klimova T.A.</copyright-holder><copyright-holder xml:lang="ru">Дускаев Г.К., Лазебник К.С., Климова Т.А.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by-nc/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://agrojournal.rudn.ru/agronomy/article/view/19837">https://agrojournal.rudn.ru/agronomy/article/view/19837</self-uri><abstract xml:lang="en"><p style="text-align: justify;">In modern world, there is a need to search for alternatives to antibiotics due to the growing resistance of microorganisms. Plant extracts can be a promising replacement. Due to biological functions, they can suppress the development of various processes associated with pathogenicity and virulence, in particular, the Quorum sensing process. Based on the above, the aim of the study was to assess the bioactivity of 7,8-dihydroxy-4- methylcoumarin and 20% chlortetracycline in relation to the microbial diversity of the cecum of broiler chickens. 4 groups of broiler chickens were formed for the experiment. The control group received a diet without additives (basic diet (BD)); group I - BD + 20% chlortetracycline, at the dosage 0.63 g/kg bw per day, group II - BD + 7,8-dihydroxy-4-methylcoumarin at a dose of 9.0 mcg/ kg bw per day; Group III - BD + 7,8-dihydroxy-4-methylcoumarin + 20% chlortetracycline. The NGS of the 16S rRNA gene was used as a research method. Analysis of the results showed that addition of coumarin, the antibiotic and their combination to the poultry diet had an impact on formation of the microbial composition of intestine. Moreover, there was a decrease in the number of Lactobacillaceae , Lachnospiraceae and Erysipelotrichaceae families. In addition, the proportion of opportunistic Streptococcus flora decreased more than by 10 %.</p></abstract><trans-abstract xml:lang="ru"><p style="text-align: justify;">В современных условиях существует необходимость поиска альтернатив антибиотикам в связи с растущей резистентностью микроорганизмов. Перспективной заменой могут выступать растительные экстракты, которые благодаря своим биологическим функциям могут подавлять развитие различных процессов, связанных с патогенностью и вирулентностью, в частности, процесс Quorum sensing. Цель исследования - о ценка биоактивности 7,8-дигидрокси-4-метилкумарина и 20% хлортетрациклина по отношению к микробному разнообразию слепого отдела кишечника цыплят-бройлеров. Для эксперимента были сформированы 4 группы цыплят-бройлеров. Контрольная группа получала рацион без добавок (основной рацион (ОР)); I группа - OР + 20% хлортетрациклин в дозировке 0,63 г/ кг ж. м./ сут, II группа - О Р + 7,8-дигидрокси-4-метилкумарин в дозе 9,0 мкг/кг ж. м./сут; III группа - O P + 7,8-дигидрокси-4-метилкумарин + 20% хлортетрациклин. В качестве метода исследования использовалось NGS гена 16S рРНК. Анализ результатов показал, что добавление кумарина, антибиотика и их сочетания в рацион птицы оказали влияние на формирование микробного состава кишечника. При этом наблюдается сокращение численности семейств Lactobacillaceae , Lachnospiraceae и Erysipelotrichaceae. Кроме этого, более чем на 10 % убывает доля условно-патогенной микрофлоры рода Streptococcus.</p></trans-abstract><kwd-group xml:lang="en"><kwd>antibiotics</kwd><kwd>broilers</kwd><kwd>microbiome</kwd><kwd>cecum</kwd><kwd>sequencing</kwd><kwd>coumarin</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>антибиотик</kwd><kwd>бройлеры</kwd><kwd>микробиом</kwd><kwd>слепой отдел кишечника</kwd><kwd>секвенирование</kwd><kwd>кумарин</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="ru">Исследование выполнено по теме НИР № FNWZ-2022-0010.</institution></institution-wrap><institution-wrap><institution xml:lang="en">The research was financially supported by the Ministry of Science and Higher Education of the Russian Federation, State Assignment no. 0445-2021-0016.</institution></institution-wrap></funding-source></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Cegelski L, Marshall GR, Eldridge GR, Hultgren SJ. The biology and future prospects of antivirulence therapies. Nat Rev Microbiol. 2008;6(1):17-27. doi: 10.1038/nrmicro1818</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Cooper MA, Shlaes D. Fix the antibiotics pipeline. Nature. 2011;472:32. doi: 10.1038/472032a</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>LaSarre B, Federle MJ. Exploiting quorum sensing to confuse bacterial pathogens. Microbiol Mol Biol Rev. 2013;77(1):73-111. doi: 10.1128/Mmbr.00046-12</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>De la Fuente-Núñez C, Korolik V, Bains M, Nguyen U, Breidenstein EBM, Horsman S, Lewenza S, Burrows L, Hancock RE. Inhibition of bacterial biofilm formation and swarming motility by a small synthetic cationic peptide. Antimicrobial Agents and Chemotherapy. 2012;56(5):2696-2704. doi: 10.1128/AAC.00064-12</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Reen FJ, Gutiérrez-Barranquero JA, Parages ML, O’Gara F. Coumarin: a novel player in microbial quorum sensing and biofilm formation inhibition. Appl Microbiol Biotechnol. 2018;102:2063-2073. doi: 10.1007/s00253-018-8787-x</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Zhu N, Wang J, Yu L, Zhang Q, Chen K, Liu B. Modulation of growth performance and intestinal microbiota in chickens fed plant extracts or virginiamycin. Front Microbiol. 2019;10:1333. doi: 10.3389/fmicb.2019.01333</mixed-citation></ref><ref id="B7"><label>7.</label><citation-alternatives><mixed-citation xml:lang="en">Rudenko PA, Vatnikov YA, Rudenko AA, Rudenko VB. Epizootic analysis of livestock farms disadvantaged by factor infections. Scientific life. 2020;15(4):572-585. (In Russ.). doi: 10.35679/1991-9476-2020-15-4-572-585</mixed-citation><mixed-citation xml:lang="ru">Руденко П.А., Ватников Ю.А., Руденко А.А., Руденко В.Б. Эпизоотический анализ животноводческих ферм, неблагополучных по факторным инфекциям // Научная жизнь. 2020. Т. 15. № 4 (104). С. 572-585. doi: 10.35679/1991-9476-2020-15-4-572-585</mixed-citation></citation-alternatives></ref><ref id="B8"><label>8.</label><mixed-citation>Vatnikov Y, Shabunin S, Kulikov E, Karamyan A, Lenchenko E, Sachivkina N, Lenchenko E, Karamyan A, Kulikov E, Shabunin S. Effectiveness of biologically active substances from Hypericum perforatum L. in the complex treatment of purulent wounds. International Journal of Pharmaceutical Research. 2020;12(4):1108-1117. doi: 10.31838/19ijpr/2020.12.04.078</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Wong SYY, Grant IR, Friedman M, Elliott CT, Situ C. Antibacterial activities of naturally occurring compounds against Mycobacterium avium subsp. paratuberculosis. Appl Environ Microbiol. 2008;74(19):5986- 5990. doi: 10.1128/AEM.00981-08</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Al-Majedy YK, Al-Duhaidahawi DL, Al-Azawi KF, Al-Amiery AA, Kadhum AAH, Mohamad AB. Coumarins as potential antioxidant agents complemented with suggested mechanisms and approved by molecular modeling studies. Molecules. 2016;21(2):135. doi:10.3390/molecule</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>D’Almeida RE, Molina RDI, Viola CM, Luciardi MC, Nieto Peñalver C, Bardon A, Arena ME. Comparison of seven structurally related coumarins on the inhibition of Quorum sensing of Pseudomonas aeruginosa and Chromobacterium violaceum. Bioorg Chem. 2017;73:37-42. doi: 10.1016/j.bioorg.2017.05.011</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Yang L, Ding W, Xu Y, Wu D, Li S, Chen J, Guo B. New Insights into the Antibacterial Activity of Hydroxycoumarins against Ralstonia solanacearum. Molecules. 2016; 21(4):468. doi: 10.3390/molecules21040468</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Deryabin D, Inchagova K, Rusakova E, Duskaev G. Coumarin’s anti-quorum sensing activity can be enhanced when combined with other plant-derived small molecules. Molecules. 2021;26(1):208. doi: 10.3390/molecules26010208</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Stanley D, Denman SE, Hughes RJ, Geier MS, Crowley TM, Chen H, Haring VR, Moore RJ. Intestinal microbiota associated with differential feed conversion efficiency in chickens. Appl Microbiol Biotechnol. 2012;96:1361-1369. doi: 10.1007/s00253-011-3847-5</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>15. Videnska P, Faldynova M, Juricova H, Babak V, Sisak F, Havlickova H, Rychlik I. Chicken faecal microbiota and disturbances induced by single or repeated therapy with tetracycline and streptomycin. BMC Vet Res. 2013;9:30. doi: 10.1186/1746-6148-9-30</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Turnbaugh PJ, Ley RE, Mahowald MA, Vincent M, Mardis ER, Gordon JI. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature. 2006;444:1027-1031. doi: 10.1038/nature05414</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Torok VA, Allison GE, Percy NJ, Ophel-Keller K, Hughes RJ. Influence of antimicrobial feed additives on broiler commensal posthatch gut microbiota development and performance. Appl Environ Microbiol. 2011;77:3380-3390. doi: 10.1128/AEM.02300-10</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Thiennimitr P, Winter SE, Winter MG, Xavier MN, Tolstikov V, Huseby DL, Sterzenbach T, Tsolis RM, Roth JR, Bäumler AJ. Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota. PNAS. 2011;108(42):17480-17485. doi: 10.1073/pnas.1107857108</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Winter SE, Thiennimitr P, Winter MG, Butler BP, Huseby DL, Crawford RW, Russell JM, Bevins CL, Adams LG, Tsolis RM, Roth JR, Bäumler AJ. Gut inflammation provides a respiratory electron acceptor for Salmonella. Nature. 2010;467:426-429. doi: 10.1038/nature09415</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Medvecky M, Cejkova D, Polansky O, Karasova D, Kubasova T, Cizek A, Rychlik I. Whole genome sequencing and function prediction of 133 gut anaerobes isolated from chicken caecum in pure cultures. BMC Genomics. 2018;19(1):561. doi: 10.1186/s12864-018-4959-4</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Yang Q, Liang Q, Balakrishnan B, Belobrajdic DP, Feng QJ, Zhang W. Role of Dietary Nutrients in the Modulation of Gut Microbiota: A Narrative Review. Nutrients. 2020;12(2):381. doi: 10.3390/nu12020381</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Zackular JP, Baxter NT, Iverson KD, Sadler WD, Petrosino JF, Chen GY, Schloss PD. The gut microbiome modulates colon tumorigenesis. mBio. 2013;4(6): e00692-13. doi: 10.1128/mBio.00692-13</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Olnood CG, Beski SSM, Choct M, Iji PA. Novel probiotics: their effects on growth performance, gut development, microbial community and activity of broiler chickens. Animal Nutrition. 2015;1(3):184-191. doi: 10.1016/j.aninu.2015.07.003.43</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Vatnikov Y, Shabunin S, Karamyan A, Kulikov E, Sachivkina N., Stepanishin V, Vasilieva E, Bobkova N, Lucay V, Avdotin V, Zenchenkova A, Rudenko P, Rudenko A. Antimicrobial activity of Hypericum perforatum L. International Journal of Pharmaceutical Research. 2020;12(Suppl.1):723-730. doi: 10.31838/ijpr/2020.SP1.113</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Videnska P, Sedlar K, Lukac M, Faldynova M, Gerzova L, Cejkova D, Sisak F, Rychlik I. Succession and replacement of bacterial populations in the caecum of egg laying hens over their whole life. PLoS One. 2014;9(12):e115142. doi: 10.1371/journal.pone.0115142</mixed-citation></ref><ref id="B26"><label>26.</label><citation-alternatives><mixed-citation xml:lang="en">Grozina AA. Gut microbiota of broiler chickens influenced by probiotics and antibiotics as revealed by T-RFLP and RT-PCR. Agricultural biology. 2014;49(6):46-58. (In Russ.). doi: 10.15389/agrobiology.2014.6.46eng</mixed-citation><mixed-citation xml:lang="ru">Грозина А.А. Состав микрофлоры желудочно-кишечного тракта у цыплят-бройлеров при воздействии пробиотика и антибиотика (по данным T-RFLP - R T-PCR) // Сельскохозяйственная биология. 2014. № 6. С. 46-58. doi: 10.15389/agrobiology.2014.6.46rus</mixed-citation></citation-alternatives></ref><ref id="B27"><label>27.</label><mixed-citation>Yu M, Mu C, Zhang C, Yang Y, Su Y, Zhu W. Marked response in microbial community and metabolism in the ileum and cecum of suckling piglets after early antibiotics exposure. Front Microbiol. 2018;9:1166. doi: 10.3389/fmicb.2018.01166</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Mancabelli L, Ferrario C, Milani C, Mangifesta M, Turroni F, Duranti S, Lugli GA, Viappiani A, Ossiprandi MC, van Sinderen D, Ventura M. Insights into the biodiversity of the gut microbiota of broiler chickens. Environ Microbiol. 2016;18(12):4727-4738. doi: 10.1111/1462-2920.13363</mixed-citation></ref><ref id="B29"><label>29.</label><citation-alternatives><mixed-citation xml:lang="en">Ilyina, LA, Yildirim, EA, Nikonov IN, Filippova VA, Laptev GY, Novikova NI, Grozina A.A., Lenkova T.N., Manukyan V.A., Fisinin V.I., Egorovet I.A. Taxons of chicken cecum microbiom are abundant, and influenced by the combined feed composition and decreased metabolizable energy. Agricultural biology. 2015;50(6):817-824. (In Russ.). doi: 10.15389/agrobiology.2015.6.817rus</mixed-citation><mixed-citation xml:lang="ru">Ильина Л.А., Йылдырым Е.А., Никонов И.Н., Филиппова В.А., Лаптев Г.Ю., Новикова Н.И., Грозина А.А., Ленкова Т.Н., Манукян В.А., Фисинин В.И., Егоров И.А. Таксономическое разнообразие микробиома слепых отростков кишечника у цыплят-бройлеров и его изменение под влиянием комбикормов с подсолнечным шротом и сниженной обменной энергией // Сельскохозяйственная биология. 2015. № 50(6). С. 817-824. doi: 10.15389/agrobiology.2015.6.817rus</mixed-citation></citation-alternatives></ref><ref id="B30"><label>30.</label><mixed-citation>Rychlik I. Composition and Function of Chicken Gut Microbiota. Animals. 2020;10(1):103. doi: 10.3390/ani10010103</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Duskaev G, Kvan O, Kosyan D, Rakhmatullin S, Levakhin G. Coumarin derivative and Bacillus cereus change live weight and cecal ecology in broilers. AIMS Agriculture and Food. 2021;6(1):360-380. doi: 10.3934/ agrfood.2021022</mixed-citation></ref></ref-list></back></article>
