Specific Identification Method based on PCR for Drosophila melanogaster
- Authors: Naserzadeh Y.1,2, Pakina E.N.1, Nafchi A.M.3, Gadzhikurbanov A.S.1
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Affiliations:
- Peoples’ Friendship University of Russia
- All-Russian Plant Quarantine Centre
- University Sains Malaysia
- Issue: Vol 15, No 2 (2020)
- Pages: 134-141
- Section: Plant protection
- URL: https://agrojournal.rudn.ru/agronomy/article/view/19561
- DOI: https://doi.org/10.22363/2312-797X-2020-15-2-134-141
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Abstract
D. melanogaster is one of the most harmful citrus fruit flies having a large number of host plants. The molecular diagnostic method has been created for identification the D. melanogaster from another non-quarantine species Drosophila spp. The proposed method for differentiation is to use the mitochondrial DNA cytochrome oxidase I gene region 709-bp. We amplified samples of DNA with primers Droso-S391 and Droso-A381 by D. melanogaster, D. suzukii, and D. Simulans collections in the laboratory samples from many countries and contrasted with sequences of other GenBank Drosophila taxa. The findings of a polymerase chain reaction (PCR) based on DNA sequence polymorphisms showed that these primers accurately identify the area of the gene as well as the unique primers of Drosophila melanogaster.
About the authors
Yousef Naserzadeh
Peoples’ Friendship University of Russia; All-Russian Plant Quarantine Centre
Author for correspondence.
Email: unaserzadeh@gmail.com
Researcher, Agro-Biotechnological Department, Agrarian and Technological Institute
Moscow, Russian Federation; Moscow region, Russian FederationElena N. Pakina
Peoples’ Friendship University of Russia
Email: e-pakina@yandex.ru
Associate Professor, Candidate of Biological Sciences, Agro-Biotechnological Department, Agrarian and Technological Institute
Moscow, Russian FederationAbdorreza M. Nafchi
University Sains Malaysia
Email: amohammadi@usm.my
Professor
Penang, MalaysiaAnvar Sh. Gadzhikurbanov
Peoples’ Friendship University of Russia
Email: gadcgikurbanow@mail.ru
Agroengineering Department, Agrarian and Technological Institute
Moscow, Russian FederationReferences
- Asplen MK, Anfora G, Biondi A, Choi DS, Chu D, Daane KM, et al. Invasion biology of spotted wing Drosophila (Drosophila suzukii): a global perspective and future priorities. Journal of Pest Science. 2015; 88(3):469-494. doi: 10.1007/s10340-015-0681-z
- Kanzawa T. Studies on Drosophila suzukii mats. Kofu: Yamanashi Agricultural Experimental Station; 1939.
- Burrack HJ, Fernandez GE, Spivey T, Kraus DA. Variation in selection and utilization of host crops in the field and laboratory by Drosophila suzukii Matsumara (Diptera: Drosophilidae), an invasive frugivore. Pest Management Science. 2013; 69(10):1173-1180. doi: 10.1002/ps.3489
- Parchami-Araghi M, Pont AC, Gilasian E, Basavand F, Mousavi H. First Palaearctic record of the genus Pygophora Schiner, 1868 (Diptera: Muscidae) from Iranian Baluchestan. Zoology in the Middle East. 2017; 63(3):280-282. doi: 10.1080/09397140.2017.1331589
- Naserzadeh Y, Mahmoudi N, Pakina E, Wase M, Anne I, Heydari M, et al. Parameters Affecting the Biosynthesis of Gold Nanoparticles Using the Aquatic Extract of Scrophularia striata and their Antibacterial Properties. Journal of Nanoanalysis. 2019; 6(2):105-114. doi: 10.22034/JNA.2019.667091
- Mans DR, Sairras S, Ganga D, Kartopawiro J. Exploring the global animal biodiversity in the search for new drugs-insects. J Transl Sci. 2016; 3(1):371-386. doi: 10.15761/JTS.1000164
- Walsh DB, Bolda MP, Goodhue RE, Dreves AJ, Lee J, Bruck DJ, et al. Drosophila suzukii (Diptera: Drosophilidae): invasive pest of ripening soft fruit expanding its geographic range and damage potential. Journal of Integrated Pest Management. 2011; 2(1): G1-G7. doi: 10.1603/IPM10010
- Nikolouli K, Colinet H, Renault D, Enriquez T, Mouton L, Gibert P, et al. Sterile insect technique and Wolbachia symbiosis as potential tools for the control of the invasive species Drosophila suzukii. Journal of pest science. 2018; 91(2):489-503. doi: 10.1007/s10340-017-0944-y
- Rota-Stabelli O, Ometto L, Tait G, Ghirotto S, Kaur R, Drago F, et al. Distinct genotypes and phenotypes in European and American strains of Drosophila suzukii: implications for biology and management of an invasive organism. Journal of Pest Science. 2020; 93(1):77-89. doi: 10.1007/s10340-019-01172-y
- Diepenbrock LM, Burrack HJ. Variation of within crop microhabitat use by Drosophila suzukii (Diptera: Drosophilidae) in blackberry. Journal of Applied Entomology. 2016; 141(1-2):1-7. doi: 10.1111/jen.12335
- Poyet M, Eslin P, Héraude M, Le Roux V, Prévost G, Gibert P, et al. Invasive host for invasive pest: when the Asiatic cherry fly (Drosophila suzukii) meets the American black cherry (Prunus serotina) in Europe. Agricultural and forest entomology. 2014; 16(3):251-259. doi: 10.1111/afe.12052
- Correa SC, Wille CL, Hoffer H, Boff MI, Franco CR. Oviposition preference and biology of fruit fl es (Diptera: Tephritidae) on grape vine genotypes. Revista Caatinga. 2018; 31(4):850-859. doi: 10.1590/1983-21252018v31n407rc
- Hauser M. A historic account of the invasion of Drosophila suzukii (Matsumura) (Diptera: Drosophilidae) in the continental United States, with remarks on their identification. Pest management science. 2011; 67(11):1352- 1357. doi: 10.1002/ps.2265
- Landolt PJ, Adams T, Rogg H. Trapping spotted wing drosophila, Drosophila suzukii (Matsumura) (Diptera: Drosophilidae), with combinations of vinegar and wine, and acetic acid and ethanol. Journal of Applied Entomology. 2012; 136(1-2):148-154. doi: 10.1111/j.1439-0418.2011.01646.x
- Nestel D, Nemny-Lavy E, Chang CL. Lipid and protein loads in pupating larvae and emerging adults as affected by the composition of Mediterranean fruit fly (Ceratitis capitata) meridic larval diets. Archives of Insect Biochemistry and Physiology. 2004; 56(3):97-109. doi: 10.1002/arch.20000
- Chang CL. Effect of amino acids on larvae and adults of Ceratitis capitata (Diptera: Tephritidae). Annals of the Entomological Society of America. 2004; 97(3):529-535. doi: 10.1603/0013-8746(2004)097[0529: EOAAOL]2.0.CO;2
- Rashid MA, Andongma AA, Dong YC, Ren XM, Niu CY. Effect of gut bacteria on fitness of the Chinese citrus fl , Bactrocera minax (Diptera: Tephritidae). Symbiosis. 2018; 76(1):63-69. doi: 10.1007/s13199-018-0537-4
- Green L, Battlay P, Fournier-Level A, Good RT, Robin C. Cisand trans-acting variants contribute to survivorship in a naïve Drosophila melanogaster population exposed to ryanoid insecticides. Proceedings of the National Academy of Sciences. 2019; 116(21):10424-10429. doi: 10.1073/pnas.1821713116
- Lachaise D, Cariou ML, David JR, Lemeunier F, Tsacas L, Ashburner M. Historical biogeography of the Drosophila melanogaster species subgroup. In: Hecht MK, Wallace B, Prance GT. (eds). Evolutionary biology. Boston, MA: Springer; 1988. p.159-225. doi: 10.1007/978-1-4613-0931-4_4
- Lee CH, Rimesso G, Reynolds DM, Cai J, Baker NE. Whole-genome sequencing and iPLEX MassARRAY genotyping map an EMS-induced mutation affecting cell competition in Drosophila melanogaster. G3: Genes, Genomes, Genetics. 2016; 6(10):3207-3217. doi: 10.1534/g3.116.029421
- Lillesaar C, Gaspar P. Serotonergic Neurons in Vertebrate and Invertebrate Model Organisms (Rodents, Zebrafish, Drosophila melanogaster, Aplysia californica, Caenorhabditis elegans). In: Pilowsky PM. (ed.) Serotonin. Academic Press; 2019. p.49-80. doi: 10.1016/B978-0-12-800050-2.00003-6
- Lynch ZR, Schlenke TA, de Roode JC. Evolution of behavioural and cellular defences against parasitoid wasps in the Drosophila melanogaster subgroup. Journal of Evolutionary Biology. 2016; 29(5):1016-1029. doi: 10.5061/dryad.5t5m4
- Mahmoudi N, Naserzadeh Y, Pakina EN, Limantceva LA, Nejad DK. Molecular identifi of Ditylenchus destructor nematode with PCR Species-Specific primers in the Moscow region. RUDN Journal of Agronomy and Animal Industries. 2019; 14(4):430-436. doi: 10.22363/2312-797X-2019-14-4-430-436
- Melcarne C, Ramond E, Dudzic J, Bretscher AJ, Kurucz É, Andó I, et al. Two Nimrod receptors, NimC1 and Eater, synergistically contribute to bacterial phagocytosis in Drosophila melanogaster. The FEBS Journal. 2019; 286(14):2670-2691. doi.org/10.1111/febs.14857
- Naserzadeh Y, Kartoolinejad D, Mahmoudi N, Zargar M, Pakina E, Heydari M, et al. Nine strains of Pseudomonas fluorescens and P. putida: Effects on growth indices, seed and yield production of Carthamus tinctorius L. Research on Crops. 2018; 19(4):622-632. doi: 10.31830/2348-7542.2018.0001.39
- Naserzadeh Y, Nafchi AM, Mahmoudi N, Nejad DK, Gadzhikurbanov ASh. Effect of combined use of fertilizer and plant growth stimulating bacteria Rhizobium, Azospirillum, Azotobacter and Pseudomonas on the quality and components of corn forage in Iran. RUDN Journal of Agronomy and Animal Industries. 2019; 14(3):209-224. doi: 10.22363/2312-797X-2019-14-3-209-224
- Yassin A, Debat V, Bastide H, Gidaszewski N, David JR, Pool JE. Recurrent specialization on a toxic fruit in an island Drosophila population. Proceedings of the National Academy of Sciences. 2016; 113(17):4771-4776. doi: 10.1073/pnas.1522559113
- Naserzadeh Y, Mahmoudi N, Pakina E. Antipathogenic effects of emulsion and nanoemulsion of cinnamon essential oil against Rhizopus rot and grey mold on strawberry fruits. Foods and Raw Materials. 2019; 7(1):210- 216. doi: 10.21603/2308-4057-2019-1-210-216.